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早期抗生素应用对早产儿肠道菌群建立的影响

Impact on the development of intestinal microbiota of early antibiotics utilization in preterm neonates

  • 摘要: 目的 应用16S核糖体DNA(16S ribosome DNA,16S rDNA)高通量测序技术探讨抗生素对早产儿肠道菌群建立的影响。方法 收集2019年8月-2020年2月在湖南省妇幼保健院出生、重症监护室住院的胎龄在30~36+6周早产儿60例进行临床研究,根据临床治疗需要将早产儿分为两组,分别为抗生素暴露组35例(应用抗生素≥7 d)、抗生素非暴露组25例(住院期间未用抗生素),分别于生后2 h内、出生后14 d收集其粪便,采用16S rDNA测序技术对粪便菌群进行分析。利用操作分类单位(operational taxonomic units,OTU)对原始数据进行处理,获得最终的有效数据,对所有样品的全部有效数据序列进行聚类,形成OTU;应用韦恩图(Venn)结合OTU所代表的物种找出不同环境的核心微生物。结果 两组患儿出生2 h内肠道均有大量细菌存在,以产气荚膜杆菌、链球菌和葡萄球菌为主,肠道菌群组间比较差异无统计学意义(P> 0.05);抗生素暴露组出生2 h内及第14天肠道菌群排名前3位的均是产气荚膜杆菌、链球菌、肠球菌,差异无统计学意义(P> 0.05);嗜糖假单胞菌在出生14 d明显减少、大肠埃希菌在出生14 d明显增多,差异均有统计学意义(均P<0.05);抗生素非暴露组肠道菌群出生2 h内及第14天排名前3位的均是产气荚膜杆菌、葡萄球菌、肠球菌,差异无统计学意义(P> 0.05)。由OTU分布的Venn图显示,抗生素暴露组出生2 h内生物多样性多于出生第14天;出生第14天抗生素非暴露组生物多样性多于抗生素暴露组。结论 早产儿出生时肠道内就有大量菌群存在,使用抗生素后可显著降低肠道菌群丰度,大肠埃希菌明显增多,出生第14天两组均未检出乳酸杆菌,建议临床尽量缩短抗生素使用时间。

     

    Abstract: ObjectiveTo investigate the effects of antibiotics on the development of intestinal microflora in preterm neonates by 16S ribosome DNA(16S rDNA) high throughput sequencing technology.MethodsTotally 60 preterm neonates with gestational age of 30-36+6 weeks hospitalized in the intensive care unit of Hunan Maternal and Child Health Hospital from August 2019 to February 2020 were enrolled. According to the clinical treatment needs, preterm neonates were divided into two groups: feces of 35 patients in the antibiotic exposure group(antibiotics utilization ≥7 d) and 25 patients in the antibiotic non-exposure group(no use of antibiotics during hospitalization) were collected within 2 hours and 14 days after birth, respectively. Fecal flora was analyzed by 16S rDNA sequencing technology. Operational taxonomic units(OTU) were used to process the original data to obtain the final effective data, and all the effective data sequences of whole samples were clustered to form OTU. Venn diagram was used to identify the core microorganisms in different environments in combination with the species represented by OTU.ResultsThere were a large amount of intestinal bacteria in both groups within 2 h after birth, mainly including bacillus perfringens, streptococcus and staphylococcus, and the difference was not statistically significant(P> 0. 05). The top 3 intestinal flora were all perfringens, streptococcus and enterococcus within 2 h after birth and at 14th day of birth in the antibiotic exposure group(P> 0. 05). But pseudomonas saccharophil decreased significantly and escherichia coli increased significantly at 14th day of birth(P< 0. 05). The top 3 intestinal microflora were all bacillus perfringens, staphylococcus and enterococcus within 2 h after birth and at 14th day of birth in antibiotic non-exposure group(P> 0. 05). According to the Venn diagram of OTU distribution, the biodiversity within 2 h after birth was more than that at 14th day of birth in antibiotic exposure group; but at 14th day of birth, the biodiversity of the antibiotic non-exposed group was higher than that of the antibiotic exposed group.ConclusionThere are a large amount of intestinal flora in premature infants at birth. Antibiotics can significantly reduce the abundance of intestinal flora, leading to the development of more escherichia coli. Lactobacillus are not found in both groups at day 14 of birth. It is suggested to reduce the period of antibiotics utilization.

     

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